BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006G10SP1|AL425592
(641 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1717 1168 0.0
>3x_Contig1717
Length = 18389
Score = 1168 bits (587), Expect = 0.0
Identities = 631/643 (98%), Gaps = 4/643 (0%)
Strand = Plus / Plus
Query: 1 aagaatggcagaatgagttaggatggattccgtgattttagtctkctgaaaagtgaaaag 60
|||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 5905 aagaatggcagactgagttaggctggattccgtgattttagtctgctgaaaagtgaaaag 5964
Query: 61 atamaaaaattacatttaaatctcattacagatttcaaagagaaatcgaactgtaagtga 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5965 atacaaaaattacatttaaatctcattacagatttcaaagagaaatcgaactgtaagtga 6024
Query: 121 gctagattcaaaagtttaacatttaattaaccaagaagatatcgggataggagaccttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6025 gctagattcaaaagtttaacatttaattaaccaagaagatatcgggataggagaccttga 6084
Query: 181 acatcccaattgaaaccaagaaataacatgagaattgtgttacagaaagtaagcgaa-st 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6085 acatcccaattgaaaccaagaaataacatgagaattgtgttacagaaagtaagcgaagct 6144
Query: 240 agcgtcaccgttggaagcgcagttgtttcccaaattaaacatggatacatgctattagtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6145 agcgtcaccgttggaagcgcagttgtttcccaaattaaacatggatacatgctattagtt 6204
Query: 300 gggattggtactgatgataagctagaagatattgacaaactgtcgaagaaaatactcaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6205 gggattggtactgatgataagctagaagatattgacaaactgtcgaagaaaatactcaca 6264
Query: 360 tttcggggatttgacgatgatgcaggttatggatggaaaagaaacattagcgaagtggna 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6265 tttcggggatttgacgatgatgcaggttatggatggaaaagaaacattagcgaagtgg-a 6323
Query: 420 tggcgagatcttatgcgtgtcccaattcacacttatggcacgtacaagcaagggcactaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6324 tggcgagatcttatgcgtgtcccaattcacacttatggcacgtacaagcaagggcactaa 6383
Query: 480 accagatttccatttagcacagcgtggggaattagccaatgaattgtatggacaatttat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6384 accagatttccatttagcacagcgtggggaattagccaatgaattgtatggacaatttat 6443
Query: 540 ggacaagttgaaggcaggattgggagacgataaggtacaaaacggtgtatttggagccat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6444 ggacaagttgaaggcaggattgggagacgataaggtacaaaacggtgtatttggagccat 6503
Query: 600 gatgagttgcaagttkatctaacgagggt-tcgtgactattat 641
||||||||||||||| | | ||||||||| ||||||||||||
Sbjct: 6504 gatgagttgcaagttga-caaacgagggtcccgtgactattat 6545
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4410
Number of Sequences: 1807
Number of extensions: 4410
Number of successful extensions: 118
Number of sequences better than 1.0e-20: 1
length of query: 641
length of database: 10,358,551
effective HSP length: 16
effective length of query: 625
effective length of database: 10,329,639
effective search space: 6456024375
effective search space used: 6456024375
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)